Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013323.1 Corchorus capsularis cultivar CVL-1 contig13344, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57905

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
487--541
16
3.3
16
84
5
65
78
0
18
3
0.90
481--540
11
5.3
11
78
11
50
76
0
20
3
0.92
2737--3788
331
3.2
329
86
4
1381
34
16
15
34
1.90
3839--4298
157
2.9
156
89
2
654
36
16
20
26
1.94
16848--16876
7
4.1
7
100
0
58
13
0
58
27
1.36
17530--17564
2
17.5
2
100
0
70
48
0
0
51
1.00
44027--44063
2
19.0
2
84
15
51
48
2
0
48
1.15
47610--47638
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!