Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013326.1 Corchorus capsularis cultivar CVL-1 contig13347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28013

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3657--3707
25
2.0
25
100
0
102
47
23
11
17
1.81
11856--11884
14
2.1
14
100
0
58
31
41
0
27
1.56
24224--24263
20
2.0
20
90
5
62
40
15
0
45
1.46
25192--25222
15
2.1
15
93
0
53
16
29
32
22
1.95
26206--26268
31
2.1
31
85
8
85
9
14
19
57
1.64

Tables:   1

The End!