Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013329.1 Corchorus capsularis cultivar CVL-1 contig13350, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7387

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4886--4947
24
2.7
22
80
11
70
74
0
9
16
1.07
5009--5058
17
3.3
15
81
13
59
48
6
10
36
1.61
5017--5058
14
3.0
14
76
13
50
42
7
9
40
1.65
5021--5065
13
3.2
14
81
9
56
35
6
11
46
1.66
5361--5423
10
6.4
10
82
12
60
71
12
0
15
1.15
5361--5430
22
3.2
22
91
4
106
72
11
0
15
1.11
5371--5417
12
4.2
12
81
13
64
74
10
0
14
1.07
5362--5424
31
2.0
31
82
11
76
71
12
0
15
1.15
5371--5429
12
5.4
11
73
19
52
74
10
0
15
1.06
7091--7167
22
3.4
22
68
10
64
25
28
24
20
1.99
7113--7192
25
3.3
25
70
10
85
22
25
25
27
2.00
7086--7194
47
2.3
47
95
0
191
26
25
22
24
2.00

Tables:   1

The End!