Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013330.1 Corchorus capsularis cultivar CVL-1 contig13351, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43503

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3470--3508
18
2.2
18
95
4
71
5
38
5
51
1.46
5523--5563
21
2.0
21
95
0
73
43
17
9
29
1.80
5747--5774
14
2.0
14
100
0
56
50
14
14
21
1.78
6446--6629
47
3.9
47
89
0
260
36
19
22
21
1.95
6615--6994
138
2.7
139
90
0
627
25
19
28
25
1.99
6619--7023
69
5.9
69
79
1
425
25
20
29
24
1.99
10404--10439
19
1.9
18
88
5
54
33
22
2
41
1.68
18652--18680
13
2.1
14
93
6
51
20
27
10
41
1.85
19724--19760
19
1.9
19
94
0
65
0
10
18
70
1.16
24990--25020
15
2.1
15
100
0
62
38
6
29
25
1.81
26967--26992
4
6.5
4
100
0
52
26
0
0
73
0.84
31427--31462
18
2.0
18
88
0
54
30
25
5
38
1.78
31405--31577
94
1.8
95
86
2
249
26
19
16
37
1.93
31501--31645
63
2.3
64
87
5
199
20
18
20
40
1.91

Tables:   1

The End!