Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013345.1 Corchorus capsularis cultivar CVL-1 contig13366, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8395

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
158--193
17
2.1
17
100
0
72
44
22
11
22
1.84
594--756
31
5.5
31
74
12
137
34
26
21
17
1.95
636--683
22
2.3
21
86
10
64
39
25
14
20
1.91
603--705
53
1.9
53
86
0
143
36
27
18
17
1.93
2163--2275
55
2.1
55
93
0
190
26
17
22
33
1.96
5931--5998
31
2.2
31
89
0
100
52
20
5
20
1.67
6528--6556
15
1.9
15
100
0
58
48
0
41
10
1.37

Tables:   1

The End!