Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013348.1 Corchorus capsularis cultivar CVL-1 contig13369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24026

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3648--3724
32
2.4
32
82
2
84
27
24
27
20
1.99
5204--5270
32
2.1
32
100
0
134
37
17
5
38
1.75
20444--20499
17
3.2
17
72
20
53
25
16
0
58
1.37
20671--20716
14
3.4
14
74
14
51
17
23
4
54
1.61
20711--20778
26
2.6
27
81
6
68
27
19
2
50
1.62
20751--20821
32
2.2
33
85
10
92
21
19
5
53
1.65
20850--20946
40
2.4
38
76
18
99
19
24
5
50
1.68
22022--22049
2
14.0
2
100
0
56
50
0
0
50
1.00
22193--22240
10
4.5
10
76
23
53
27
2
0
70
0.98
22193--22239
17
2.9
16
82
17
69
27
2
0
70
0.99

Tables:   1

The End!