Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013350.1 Corchorus capsularis cultivar CVL-1 contig13371, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23326

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2657--2826
62
2.7
63
88
4
247
21
18
15
44
1.87
4660--5500
63
13.3
63
89
3
1257
20
18
18
42
1.89
4660--5557
317
2.9
316
89
4
1331
20
18
18
42
1.89
5862--5935
27
2.7
27
93
0
121
18
14
25
40
1.89
7281--7305
12
2.1
12
100
0
50
52
24
16
8
1.70
16275--16424
75
2.0
75
96
0
273
42
5
17
35
1.72
22872--22919
22
2.2
22
85
7
62
47
6
33
12
1.66
23030--23326
35
8.4
35
87
6
440
30
13
21
34
1.92

Tables:   1

The End!