Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013352.1 Corchorus capsularis cultivar CVL-1 contig13373, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21423

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3100--3124
2
12.5
2
100
0
50
48
0
0
52
1.00
3139--3268
70
1.9
69
96
1
242
24
10
7
56
1.59
8439--8494
24
2.3
24
87
0
85
28
16
21
33
1.95
13630--13663
15
2.3
15
100
0
68
41
14
26
17
1.88
13648--13709
31
2.0
31
93
0
106
29
9
35
25
1.88
14203--14249
20
2.3
20
100
0
94
23
10
10
55
1.65
14925--14949
13
1.9
13
100
0
50
28
0
16
56
1.41
15338--15396
19
3.2
19
70
29
56
47
0
10
42
1.37
17056--17099
21
2.1
21
86
0
61
45
11
27
15
1.81
19707--19779
28
2.6
28
91
0
110
15
12
28
43
1.82

Tables:   1

The End!