Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013354.1 Corchorus capsularis cultivar CVL-1 contig13375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50417

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4033--4135
43
2.4
43
98
1
199
7
21
9
61
1.52
12708--12740
12
2.6
13
85
9
50
0
15
0
84
0.61
13463--13543
42
1.9
42
100
0
162
43
8
12
35
1.73
27502--27582
31
2.6
31
82
3
92
24
23
16
35
1.94
27525--27584
31
2.0
31
90
3
95
20
18
20
41
1.90
28275--28333
30
2.0
30
93
3
102
42
18
16
22
1.89
29855--29958
51
2.0
51
88
0
154
25
20
17
36
1.94
30090--30122
15
2.3
15
89
5
50
66
0
9
24
1.20
31022--31072
26
2.0
26
92
7
86
47
25
11
15
1.80
31750--31789
2
20.0
2
94
0
71
50
0
2
47
1.14
41696--41774
31
2.5
31
77
0
95
27
13
20
37
1.91
41736--41924
104
1.8
104
93
2
326
26
15
22
34
1.94

Tables:   1

The End!