Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013355.1 Corchorus capsularis cultivar CVL-1 contig13376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32352

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12242--12274
1
33.0
1
100
0
66
100
0
0
0
0.00
19066--19096
2
16.0
2
93
6
55
48
0
0
51
1.00
20759--20791
2
16.5
2
100
0
66
48
0
0
51
1.00
24480--24547
32
2.1
33
89
8
104
57
4
13
25
1.54
29776--29800
2
12.5
2
100
0
50
48
0
0
52
1.00
30287--30345
29
2.0
29
86
0
82
23
22
15
38
1.92
30752--30781
7
4.3
7
100
0
60
43
0
0
56
0.99
30741--30781
21
2.0
21
85
9
57
41
2
2
53
1.27

Tables:   1

The End!