Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013361.1 Corchorus capsularis cultivar CVL-1 contig13382, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51480

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77--107
14
2.2
14
94
0
53
3
12
0
83
0.75
7021--7083
6
10.3
6
91
8
101
0
0
14
85
0.59
7021--7083
18
3.4
19
93
6
112
0
0
14
85
0.59
14754--14790
2
18.5
2
100
0
74
48
0
0
51
1.00
24378--24456
29
2.6
30
82
9
90
40
10
26
22
1.86
28126--28156
7
4.4
7
100
0
62
29
41
12
16
1.85
32438--32482
10
4.2
11
81
16
58
44
2
8
44
1.47
32439--32482
22
2.0
22
95
0
79
45
2
9
43
1.48
38103--38251
75
2.0
75
100
0
298
40
14
4
40
1.67
38500--38524
12
2.1
12
100
0
50
92
0
8
0
0.40
39368--39395
6
4.7
6
100
0
56
67
14
17
0
1.22
49131--49159
14
2.1
14
100
0
58
34
6
20
37
1.80

Tables:   1

The End!