Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013363.1 Corchorus capsularis cultivar CVL-1 contig13384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31258

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--38
2
19.0
2
100
0
76
50
0
0
50
1.00
2314--2338
2
12.5
2
100
0
50
52
48
0
0
1.00
15190--15215
3
8.7
3
100
0
52
0
30
0
69
0.89
21053--21097
21
2.1
21
87
0
63
17
28
11
42
1.84
21381--21454
33
2.2
33
92
4
123
9
25
44
20
1.81
21381--21433
16
3.2
16
68
5
52
7
26
45
20
1.78
22991--23038
11
4.4
11
84
7
53
54
2
2
41
1.24
24332--26266
324
6.0
320
78
8
1740
33
14
16
35
1.89
26010--26534
270
1.9
269
82
7
654
33
12
15
38
1.85
26264--28081
298
5.9
298
76
11
1435
33
13
17
36
1.88
27157--28081
316
2.9
316
82
6
1080
33
13
17
35
1.89
27816--28505
268
2.6
263
83
5
809
34
14
14
36
1.88
28351--30931
321
8.0
324
81
5
2642
32
14
16
36
1.89

Tables:   1

The End!