Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013366.1 Corchorus capsularis cultivar CVL-1 contig13387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12649

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2350--2379
2
15.0
2
100
0
60
50
0
0
50
1.00
8598--8637
19
2.1
19
100
0
80
47
5
25
22
1.71
9468--9494
4
6.8
4
100
0
54
51
0
22
25
1.48
10409--10448
2
20.0
2
100
0
80
0
50
0
50
1.00
12175--12206
14
2.3
14
94
0
55
15
18
15
50
1.79
12619--12649
2
15.5
2
100
0
62
48
0
51
0
1.00

Tables:   1

The End!