Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013369.1 Corchorus capsularis cultivar CVL-1 contig13390, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32418

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3211--3338
65
2.0
65
90
0
202
34
21
15
28
1.94
7603--7660
29
2.0
30
89
3
91
25
15
12
46
1.80
11718--11778
22
2.8
22
73
11
63
36
1
13
49
1.52
18136--18166
6
5.2
6
100
0
62
32
16
51
0
1.44
21372--21411
20
2.0
20
95
0
71
27
10
35
27
1.89
21306--21477
86
2.0
86
98
0
335
25
10
27
36
1.89
21828--21900
35
2.0
37
92
5
123
24
20
27
27
1.99
24110--24298
98
1.9
98
93
0
324
34
15
16
33
1.91
31947--31997
26
2.0
26
100
0
102
33
23
0
43
1.54
32143--32169
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!