Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013371.1 Corchorus capsularis cultivar CVL-1 contig13392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55978

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11329--11399
29
2.4
29
85
2
88
46
15
14
23
1.82
12575--12630
24
2.2
26
90
6
89
58
5
5
30
1.42
12914--12946
3
11.0
3
100
0
66
0
0
33
66
0.92
15917--19295
322
10.5
320
78
7
2963
33
14
16
35
1.89
19583--20417
324
2.6
315
79
5
902
35
13
15
35
1.87
21308--21333
2
13.0
2
100
0
52
50
0
0
50
1.00
21402--21739
181
1.9
180
85
4
475
40
9
15
34
1.80
21562--25018
323
10.6
318
79
8
3198
34
14
15
35
1.88
21562--25001
645
5.3
640
79
8
3396
34
14
15
35
1.88
25018--26141
322
3.5
318
80
4
1222
33
14
16
35
1.89
26443--27917
321
4.6
319
79
6
1487
32
14
15
36
1.89
28498--28578
41
2.0
40
85
7
110
28
14
16
40
1.88

Tables:   1

The End!