Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013379.1 Corchorus capsularis cultivar CVL-1 contig13400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7275

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--37
2
16.5
2
100
0
66
51
0
0
48
1.00
1682--1727
23
2.0
23
87
4
67
21
10
21
45
1.82
1688--1732
23
1.9
24
90
4
74
22
11
20
46
1.81
3597--3628
6
5.5
6
96
3
57
56
12
0
31
1.37
3625--3658
12
2.7
13
90
4
52
58
8
11
20
1.59
5130--5188
12
5.4
11
72
13
50
66
5
8
20
1.38

Tables:   1

The End!