Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013382.1 Corchorus capsularis cultivar CVL-1 contig13403, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37962

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4003--4031
2
14.5
2
100
0
58
48
0
0
51
1.00
11390--11442
2
26.5
2
84
0
70
52
0
1
45
1.11
17181--17220
16
2.4
16
87
4
53
60
0
7
32
1.25
19451--19521
32
2.1
34
94
5
128
11
39
33
15
1.83
19512--19632
32
3.8
32
93
0
197
7
36
45
10
1.67
19719--19867
33
4.5
33
79
6
169
13
26
39
20
1.90
19750--19879
65
2.0
65
100
0
260
16
23
36
23
1.94
19783--19879
32
3.0
32
70
8
106
19
21
36
22
1.95
19877--19918
14
2.7
15
82
14
50
54
2
26
16
1.54
33076--33114
18
2.0
20
85
9
55
51
5
0
43
1.24
33434--33484
25
2.0
25
100
0
102
49
15
7
27
1.72
35084--35178
47
2.1
45
83
11
115
48
11
8
31
1.69
37739--37771
17
1.9
17
93
0
57
24
0
15
60
1.35

Tables:   1

The End!