Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013387.1 Corchorus capsularis cultivar CVL-1 contig13408, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9471

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2482--2538
16
3.4
16
69
21
53
31
5
26
36
1.79
2979--3011
10
3.3
10
100
0
66
9
0
48
42
1.35
3143--3212
29
2.4
29
85
2
86
38
28
12
20
1.89
4986--5019
7
5.0
7
85
7
52
41
41
2
14
1.61
8378--8451
2
42.5
2
68
26
53
44
1
0
54
1.08
8373--8451
19
3.7
21
78
13
81
45
1
0
53
1.08
8373--8437
29
2.3
28
84
5
87
46
1
0
52
1.10

Tables:   1

The End!