Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013388.1 Corchorus capsularis cultivar CVL-1 contig13409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22624

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3893--3922
9
3.3
9
90
0
51
33
0
33
33
1.58
3893--3931
18
2.2
18
85
0
51
38
0
30
30
1.58
7290--7314
10
2.5
10
100
0
50
48
20
8
24
1.76
8231--8264
12
2.7
13
90
4
52
20
11
8
58
1.59
8860--8904
23
2.0
23
95
0
81
37
31
11
20
1.87
12839--13105
144
1.9
144
80
4
324
37
7
2
52
1.45

Tables:   1

The End!