Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013394.1 Corchorus capsularis cultivar CVL-1 contig13415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64764

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12048--12072
2
12.5
2
100
0
50
52
0
48
0
1.00
18305--18333
2
15.0
2
92
7
51
51
0
0
48
1.00
29522--29641
60
2.0
60
100
0
240
26
6
23
43
1.78
29706--30037
166
2.0
166
95
0
601
39
12
14
33
1.84
30889--30956
30
2.2
30
94
2
118
39
14
13
32
1.85
38771--38890
58
2.1
57
90
1
186
55
12
17
15
1.70
40387--40471
29
2.9
29
86
8
118
18
31
16
32
1.94
41813--41849
17
2.2
17
95
0
65
37
27
5
29
1.79
46420--46504
29
2.9
28
86
8
116
32
16
31
18
1.94
46590--46661
35
2.1
35
91
0
117
34
1
8
55
1.39
51093--51145
25
2.1
25
100
0
106
26
3
13
56
1.54
59860--59903
3
14.7
3
100
0
88
65
0
0
34
0.93
64643--64763
2
60.5
2
94
0
98
36
1
11
50
1.49

Tables:   1

The End!