Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013399.1 Corchorus capsularis cultivar CVL-1 contig13420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11773

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2546--2693
50
3.0
50
87
5
219
7
44
10
37
1.66
4171--4196
2
13.0
2
100
0
52
50
0
0
50
1.00
6008--6112
51
2.1
51
89
1
158
4
42
12
40
1.63
8153--8298
48
3.0
49
84
5
179
25
16
28
30
1.97
8155--8298
16
8.8
16
83
6
148
25
15
28
29
1.96
9232--9452
27
7.8
27
73
13
160
9
31
34
25
1.87
9216--9452
57
4.1
57
78
12
236
8
31
34
25
1.86
9216--9402
85
2.2
84
81
7
216
8
31
35
25
1.85
9516--9574
30
1.9
31
89
6
93
8
32
38
20
1.83
9614--9713
29
3.4
29
87
2
130
11
35
35
19
1.87
11432--11466
12
2.9
12
84
16
54
51
25
17
5
1.67
11553--11577
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!