Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013405.1 Corchorus capsularis cultivar CVL-1 contig13426, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12512

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
514--565
27
1.9
27
92
7
88
55
3
15
25
1.57
5178--5239
31
2.0
31
87
0
88
46
4
17
30
1.69
6791--6829
19
2.0
20
85
5
53
41
20
17
20
1.91
11780--11830
17
3.0
16
91
8
75
54
0
0
45
0.99
11785--11831
16
2.9
15
87
12
67
55
0
0
44
0.99

Tables:   1

The End!