Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013409.1 Corchorus capsularis cultivar CVL-1 contig13430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13125

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5831--5864
17
2.0
17
88
11
52
32
5
11
50
1.63
9767--9807
17
2.6
15
82
14
55
58
0
12
29
1.34
9771--9805
17
2.1
17
94
0
61
60
0
14
25
1.35
10718--11105
193
2.0
192
95
0
704
27
20
21
31
1.98
12303--12380
22
3.5
22
75
6
86
35
19
10
34
1.85
12300--12396
44
2.2
44
83
0
122
37
18
8
36
1.81
12298--12396
22
4.5
22
73
12
78
36
19
8
36
1.81
12369--12469
44
2.3
44
81
3
105
43
12
6
36
1.70
12487--12546
22
2.7
22
86
0
75
35
23
8
33
1.85
12494--12591
44
2.2
44
82
10
121
27
21
12
38
1.89
12494--12589
22
4.4
22
81
12
99
28
20
12
38
1.89

Tables:   1

The End!