Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013410.1 Corchorus capsularis cultivar CVL-1 contig13431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25863

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2874--2915
3
14.0
3
100
0
84
33
0
0
66
0.92
4439--4510
30
2.4
30
79
2
74
19
23
29
27
1.98
10185--10407
105
2.1
104
91
0
356
29
18
18
33
1.95
11473--11507
14
2.4
14
85
4
52
37
0
0
62
0.95
11554--11578
2
12.5
2
100
0
50
48
0
0
52
1.00
14827--15017
87
2.2
88
83
3
235
30
8
22
38
1.84
14827--15045
87
2.5
87
81
2
199
30
8
24
36
1.85
17277--17310
13
2.8
12
91
8
59
91
0
8
0
0.43
19418--19449
13
2.5
13
94
0
55
12
50
6
31
1.65
19550--19629
40
2.0
40
90
0
124
31
12
13
42
1.82
21180--21222
22
2.0
22
86
9
61
32
30
6
30
1.84

Tables:   1

The End!