Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013412.1 Corchorus capsularis cultivar CVL-1 contig13433, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22425

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2620--2700
40
2.0
40
100
0
126
33
9
24
32
1.88
2667--2771
52
2.0
53
98
1
203
50
7
17
24
1.72
6430--6492
30
2.1
30
85
2
83
22
31
12
33
1.91
6580--6607
13
2.2
13
100
0
56
32
32
21
14
1.93
6639--6710
29
2.4
30
83
4
101
33
18
30
18
1.94
7963--8020
20
3.1
19
73
22
59
24
22
17
36
1.95
8014--8039
10
2.6
10
100
0
52
38
23
7
30
1.83
9889--9927
2
19.5
2
89
10
62
48
0
2
48
1.15
11037--11070
11
3.0
11
91
4
50
47
0
2
50
1.16
11711--11742
13
2.5
13
95
5
57
65
0
0
34
0.93

Tables:   1

The End!