Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013414.1 Corchorus capsularis cultivar CVL-1 contig13435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23721

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
939--1040
50
2.0
50
100
0
204
27
5
27
39
1.79
12482--12524
21
2.0
22
86
4
61
16
0
32
51
1.45
12521--12566
23
2.0
23
95
0
83
32
21
32
13
1.92
13399--13441
21
2.0
22
86
4
61
16
0
32
51
1.45
13438--13483
23
2.0
23
95
0
83
30
19
34
15
1.93
15486--15511
5
5.2
5
100
0
52
38
0
0
61
0.96

Tables:   1

The End!