Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013418.1 Corchorus capsularis cultivar CVL-1 contig13439, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66928

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82--143
26
2.4
26
91
5
99
33
1
8
56
1.38
91--139
11
4.1
11
76
19
53
34
2
8
55
1.41
52--143
11
7.1
13
65
26
52
34
2
7
55
1.40
158--217
25
2.5
25
89
5
88
43
0
21
35
1.53
287--329
20
2.1
21
86
4
61
46
9
30
13
1.75
4708--4747
20
2.0
20
90
0
62
50
15
10
25
1.74
7600--7792
61
3.1
61
93
5
307
26
5
8
59
1.49
16360--16406
24
2.0
24
95
4
87
40
17
21
21
1.91
26074--26109
17
2.0
19
89
10
58
61
22
5
11
1.50
32740--32837
39
2.5
39
81
5
108
11
41
3
43
1.56
32752--32840
24
3.7
24
75
0
88
12
40
4
42
1.63
32906--32941
6
6.0
6
86
0
54
16
38
0
44
1.48
43100--43138
15
2.6
15
88
8
53
69
0
25
5
1.09
50268--50292
12
2.1
12
100
0
50
28
48
16
8
1.74
54055--54123
33
2.1
33
81
5
77
28
20
11
39
1.87

Tables:   1

The End!