Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013420.1 Corchorus capsularis cultivar CVL-1 contig13441, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40172

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7118--7147
6
5.0
6
100
0
60
33
16
16
33
1.92
7718--7745
2
14.0
2
100
0
56
50
0
0
50
1.00
8600--8638
2
20.5
2
87
10
55
48
0
0
51
1.00
14616--14875
130
2.0
130
100
0
520
36
15
19
28
1.92
21619--22707
476
2.3
468
90
3
1708
37
11
15
35
1.84
22231--23873
672
2.4
670
92
4
2640
35
13
16
34
1.88
24797--24830
17
2.0
17
100
0
68
23
5
41
29
1.78
28840--28903
29
2.2
30
94
5
114
46
0
18
34
1.49
28893--28942
25
2.0
26
88
4
75
52
0
8
40
1.31
39485--39540
2
28.0
2
100
0
112
0
50
0
50
1.00

Tables:   1

The End!