Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013421.1 Corchorus capsularis cultivar CVL-1 contig13442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29224

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4980--5004
2
12.5
2
100
0
50
48
0
0
52
1.00
6148--6190
11
4.0
11
87
6
61
88
11
0
0
0.52
6148--6190
10
4.0
11
80
17
54
88
11
0
0
0.52
6148--6189
17
2.6
17
92
7
70
90
9
0
0
0.45
6148--6190
16
2.8
15
86
13
61
88
11
0
0
0.52
11006--11156
48
3.2
47
88
1
205
35
11
29
23
1.91
13604--13723
15
8.0
15
91
1
170
45
13
35
6
1.70
14259--14625
117
3.1
117
98
0
716
38
15
23
21
1.92
18733--18905
57
3.0
57
84
0
220
30
22
23
24
1.99
25003--25036
6
5.8
6
96
3
61
47
52
0
0
1.00
27302--27586
107
2.7
104
88
3
410
40
8
9
40
1.69
27967--28115
75
2.0
74
84
6
194
19
24
16
39
1.91
28246--28276
14
2.2
14
94
0
53
6
22
6
64
1.40

Tables:   1

The End!