Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013422.1 Corchorus capsularis cultivar CVL-1 contig13443, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22711

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9270--9313
22
2.0
22
86
8
63
40
11
4
43
1.61
9447--9568
22
5.5
23
73
13
87
33
14
9
41
1.79
9743--9784
22
1.9
22
90
0
66
40
23
4
30
1.75
9751--9896
44
3.2
44
83
9
127
36
17
10
34
1.84
9800--9931
22
6.0
22
76
11
128
37
18
10
34
1.85
9798--9928
44
3.0
43
85
5
165
35
18
10
35
1.85
9800--9931
66
2.0
66
80
5
151
37
18
10
34
1.85
11510--11574
30
2.1
31
88
2
96
47
4
20
27
1.69
12956--13024
29
2.4
29
97
2
131
40
5
11
42
1.65
14108--14142
7
5.0
7
100
0
70
14
57
14
14
1.66

Tables:   1

The End!