Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013426.1 Corchorus capsularis cultivar CVL-1 contig13447, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14247

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
720--777
17
3.3
19
77
18
72
39
3
24
32
1.72
1485--1703
109
2.0
109
98
0
420
27
15
14
42
1.86
1688--1792
33
3.1
33
77
18
110
53
0
4
41
1.22
1702--1794
38
2.5
38
84
11
129
54
0
5
39
1.23
1698--1792
30
3.0
30
82
15
113
55
0
4
40
1.19
1698--1778
5
15.4
5
80
14
92
56
0
3
39
1.17
5754--5787
16
2.1
16
100
0
68
44
17
5
32
1.73
10834--10865
1
32.0
1
100
0
64
0
0
0
100
0.00
14068--14174
29
3.6
29
80
3
106
17
28
16
36
1.92

Tables:   1

The End!