Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013427.1 Corchorus capsularis cultivar CVL-1 contig13448, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29180

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95--197
29
3.4
30
81
6
120
33
16
31
18
1.93
2710--2761
24
2.1
25
86
10
72
51
1
5
40
1.37
7410--7510
32
3.2
32
80
5
116
17
7
35
38
1.79
7411--7496
16
5.4
16
67
10
59
19
6
34
38
1.79
10492--10566
30
2.5
30
78
6
80
28
17
26
28
1.98
11950--12007
15
4.1
15
70
16
52
46
0
0
53
1.00
11985--12032
15
3.1
16
78
21
50
52
4
6
37
1.46
14106--14152
18
2.6
18
74
16
51
25
10
29
34
1.90
15641--15670
12
2.5
12
94
0
51
30
6
30
33
1.83
15719--15751
11
3.1
11
91
4
50
39
39
18
3
1.66
25321--25580
138
1.9
140
92
1
443
53
11
7
28
1.63
25873--25914
21
2.0
21
85
0
57
47
2
16
33
1.60
26126--26169
21
2.2
20
87
4
61
56
2
6
34
1.38
26441--26569
66
1.9
66
88
1
195
24
13
13
48
1.79

Tables:   1

The End!