Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013432.1 Corchorus capsularis cultivar CVL-1 contig13453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31023

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
227--295
29
2.4
29
87
0
93
20
13
28
37
1.90
8771--8807
6
6.2
6
100
0
74
0
16
16
67
1.23
12880--12922
2
23.5
2
82
17
58
48
0
0
51
1.00
12880--12923
18
2.6
18
92
7
74
50
0
0
50
1.00
19128--19167
2
20.0
2
94
0
71
52
0
0
47
1.00
19536--19735
101
2.0
103
84
4
262
30
16
15
39
1.88
30421--30459
12
3.6
12
80
19
50
25
28
15
30
1.96
30570--30595
10
2.6
10
100
0
52
38
23
7
30
1.83

Tables:   1

The End!