Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013435.1 Corchorus capsularis cultivar CVL-1 contig13456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11158

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
442--467
6
4.3
6
100
0
52
53
15
0
30
1.42
4864--4968
15
7.0
15
67
12
72
14
26
23
35
1.93
4861--4961
30
3.4
29
81
10
98
13
24
24
36
1.92
6034--6071
15
2.6
15
87
4
51
18
28
15
36
1.92
6188--6317
18
7.2
18
80
0
134
12
22
40
24
1.88
6188--6317
54
2.4
54
82
0
161
12
22
40
24
1.88
9229--9267
13
3.0
13
84
0
51
48
0
0
51
1.00
9227--9268
2
22.0
2
80
9
52
50
0
0
50
1.00
9408--9871
49
9.4
49
86
4
486
33
14
30
21
1.93

Tables:   1

The End!