Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013441.1 Corchorus capsularis cultivar CVL-1 contig13462, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13880

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--314
38
8.2
38
73
18
185
48
7
18
26
1.74
183--321
40
3.4
41
79
12
153
46
7
20
25
1.76
312--346
16
2.1
17
89
5
54
60
2
20
17
1.49
343--459
21
5.5
21
76
4
108
52
7
22
17
1.69
334--567
43
5.4
43
78
7
199
51
6
22
19
1.70
334--555
22
10.3
22
72
12
158
51
6
22
18
1.70
478--567
22
4.1
22
70
16
53
48
7
22
21
1.75
3953--3988
16
2.2
16
90
0
54
63
0
5
30
1.17
11982--12038
28
2.1
28
90
3
89
15
22
24
36
1.94

Tables:   1

The End!