Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013442.1 Corchorus capsularis cultivar CVL-1 contig13463, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8438

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
921--1243
38
8.6
38
76
14
237
49
7
18
24
1.73
924--1059
70
1.9
70
98
0
263
50
5
16
28
1.66
1112--1250
40
3.5
41
84
6
169
48
7
20
23
1.76
1241--1275
16
2.1
17
89
5
54
60
2
20
17
1.49
1272--1481
22
9.8
21
71
12
124
50
7
22
19
1.72
1263--1496
43
5.4
43
79
9
201
51
7
21
19
1.70
1304--1581
100
2.7
100
81
8
292
52
7
20
19
1.70
1508--1660
22
7.1
22
77
11
138
54
6
19
18
1.65
1522--1621
43
2.3
43
86
3
130
53
8
20
19
1.70
1522--1645
64
1.9
64
85
6
171
54
7
19
18
1.66
1598--1689
7
12.7
7
70
10
51
58
3
18
19
1.52
1508--1667
86
1.9
86
79
10
184
55
6
19
18
1.63
1622--1689
29
2.3
30
87
9
97
60
2
17
19
1.49
8390--8430
2
20.5
2
100
0
82
48
0
51
0
1.00

Tables:   1

The End!