Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013444.1 Corchorus capsularis cultivar CVL-1 contig13465, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18716

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
609--641
15
2.3
15
89
5
50
27
3
6
63
1.32
4071--4144
11
6.7
11
98
0
130
8
52
36
2
1.45
7734--7766
15
2.3
15
89
5
50
27
3
6
63
1.32
9075--9115
21
2.0
21
85
0
55
21
26
9
41
1.84
11792--11849
5
11.2
5
85
7
71
56
3
20
18
1.56
12340--12569
105
2.2
104
82
4
266
36
19
14
29
1.91
15442--15476
18
1.9
18
100
0
70
28
28
14
28
1.95

Tables:   1

The End!