Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013448.1 Corchorus capsularis cultivar CVL-1 contig13469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47306

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--40
15
2.1
15
100
0
64
31
18
12
37
1.88
6190--6224
2
17.5
2
100
0
70
51
0
48
0
1.00
8244--8321
29
2.7
29
79
2
102
41
16
24
17
1.90
15361--15398
20
1.9
20
84
10
51
36
10
13
39
1.79
16525--16564
20
2.0
20
100
0
80
45
5
25
25
1.73
20566--20610
21
2.1
21
84
8
56
48
2
2
46
1.26
30397--30629
70
3.2
70
84
10
306
36
12
0
49
1.47
30397--30635
78
3.2
77
89
7
350
36
12
0
49
1.47
36369--36656
160
1.8
160
87
3
436
35
8
4
52
1.51
37560--37649
45
2.0
45
84
0
117
33
21
22
23
1.97
42322--42404
26
3.3
25
71
6
78
63
1
30
4
1.22
42300--42404
50
2.2
47
88
8
151
62
1
30
4
1.26
42349--42389
20
2.0
20
85
4
55
73
2
24
0
0.96
46818--46868
17
3.1
16
86
8
66
35
21
21
21
1.96
47112--47157
23
2.0
24
91
4
76
36
6
10
45
1.65

Tables:   1

The End!