Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013450.1 Corchorus capsularis cultivar CVL-1 contig13471, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33632

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5389--5425
18
2.1
18
100
0
74
21
35
10
32
1.88
5666--5695
9
3.3
9
100
0
60
20
46
10
23
1.80
13638--13678
21
2.0
21
90
0
64
31
34
7
26
1.84
13842--13914
37
2.1
34
87
7
101
47
9
5
36
1.59
14444--14533
31
2.9
31
88
3
128
50
4
16
28
1.65
16808--16860
20
2.9
18
76
13
54
33
15
0
50
1.44
17447--17493
14
3.4
14
96
0
85
51
6
2
40
1.39
24495--24643
16
9.4
16
87
3
205
6
21
38
33
1.80
24495--24643
32
4.7
31
92
5
228
6
21
38
33
1.80
25090--25137
21
2.3
21
85
0
69
56
8
6
29
1.53
25215--25257
22
1.9
23
85
4
61
23
16
20
39
1.92
25243--25283
16
2.6
16
84
0
55
7
21
36
34
1.82
28738--28782
11
4.1
11
91
0
72
20
17
33
28
1.95
29221--29257
19
1.9
19
88
0
56
54
10
5
29
1.57
32253--32325
24
3.0
24
65
0
56
30
30
5
34
1.80

Tables:   1

The End!