Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013453.1 Corchorus capsularis cultivar CVL-1 contig13474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13398

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
448--496
25
1.9
26
84
12
66
73
0
22
4
1.00
4948--5140
41
4.7
41
90
1
307
43
10
19
27
1.83
5119--5700
37
15.6
37
81
10
480
47
9
17
25
1.78
5149--5510
110
3.3
109
85
5
469
49
9
16
25
1.75
5119--5510
73
5.3
73
87
3
502
48
9
16
25
1.76
5463--5761
41
7.8
40
78
13
240
45
11
18
25
1.82
5410--5761
191
1.8
191
92
1
598
44
11
17
26
1.82
5119--5700
73
7.8
74
79
12
468
47
9
17
25
1.78
5449--5771
150
2.1
152
87
6
451
44
10
18
26
1.82
7223--7363
36
3.9
35
80
11
135
44
12
17
24
1.84
7346--7595
74
3.5
73
92
2
391
43
7
26
22
1.80
7347--7595
37
6.9
37
83
4
319
43
7
26
22
1.79
7348--7645
74
4.2
65
87
8
197
41
8
25
24
1.82
7591--7695
32
3.2
32
79
13
122
38
10
21
29
1.87
7604--7789
36
5.2
36
74
13
147
43
9
19
27
1.81
7665--7820
73
2.1
73
95
0
276
50
8
17
23
1.73
11469--11499
6
5.3
6
96
3
55
51
12
0
35
1.40

Tables:   1

The End!