Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013455.1 Corchorus capsularis cultivar CVL-1 contig13476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9520

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3409--3520
33
3.4
33
90
2
163
10
24
41
23
1.85
5890--5921
13
2.4
14
85
15
50
28
6
12
53
1.62
6478--6524
13
3.5
13
72
16
51
10
27
0
61
1.29
6585--6687
21
4.9
20
74
8
98
21
25
6
46
1.75
6649--6941
36
8.0
36
83
8
371
22
19
6
52
1.68
6706--6834
14
9.7
14
63
30
52
23
20
6
49
1.72
6651--6900
105
2.4
106
93
2
432
21
20
6
51
1.70
6781--6999
22
9.8
22
71
15
130
21
19
5
52
1.67
6886--7035
65
2.3
63
77
14
162
22
18
5
54
1.64
6968--7145
57
3.2
56
75
18
137
22
18
3
55
1.57
6983--7074
35
2.6
35
81
10
100
20
19
3
56
1.56
7046--7142
50
2.0
50
87
6
144
22
18
3
55
1.56
7108--7147
21
1.9
21
84
0
53
20
17
2
60
1.48
7242--7445
38
5.4
37
81
5
203
25
15
7
51
1.69
7303--7445
76
1.9
76
92
0
241
26
13
6
53
1.64
8248--8304
30
1.9
30
82
13
73
47
15
3
33
1.63

Tables:   1

The End!