Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013457.1 Corchorus capsularis cultivar CVL-1 contig13478, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17382

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1141--1197
13
4.2
13
70
12
51
54
15
7
22
1.65
1297--1366
27
2.5
28
86
6
90
48
21
14
15
1.80
14011--14158
22
6.5
21
75
20
95
19
17
6
56
1.63
14089--14144
15
3.9
15
76
9
62
17
19
5
57
1.59
14202--14281
35
2.3
35
84
4
99
20
20
10
50
1.76
14272--14320
21
2.3
22
82
10
66
16
20
2
61
1.44
14419--14574
71
2.2
70
83
8
183
25
14
8
50
1.72
14535--14738
47
4.3
47
93
1
311
23
20
9
47
1.78
14957--15300
51
6.7
50
74
8
273
34
17
5
42
1.72
14957--15300
102
3.4
102
93
2
566
34
17
5
42
1.72
15286--15324
20
2.0
20
89
0
60
35
15
15
33
1.89

Tables:   1

The End!