Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013462.1 Corchorus capsularis cultivar CVL-1 contig13483, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20911

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2711--2868
75
2.1
74
90
2
253
19
29
9
41
1.83
3932--3958
9
3.0
9
100
0
54
11
0
0
88
0.50
6087--6187
33
3.1
33
89
1
141
26
26
17
28
1.98
7747--7792
12
3.6
12
81
16
56
43
4
6
45
1.49
7744--7791
15
3.4
15
75
16
57
45
4
6
43
1.48
8453--8491
20
2.0
20
84
0
51
30
38
12
17
1.88
9685--9710
10
2.6
10
100
0
52
50
19
7
23
1.73
9890--9950
21
2.9
21
97
0
113
19
29
34
16
1.94
9930--10010
33
2.5
33
79
4
92
23
37
28
11
1.89
10977--11010
8
4.1
8
85
7
50
58
14
2
23
1.50
11307--11347
20
2.1
19
86
4
55
34
12
12
41
1.80
16466--16507
21
2.0
21
90
0
66
21
30
30
16
1.95
16487--16593
33
3.2
33
77
7
110
21
42
27
9
1.83
19558--19757
106
1.8
106
84
7
265
21
25
19
34
1.96

Tables:   1

The End!