Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013466.1 Corchorus capsularis cultivar CVL-1 contig13487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17491

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
389--513
32
3.9
32
87
2
153
25
24
17
32
1.97
893--1019
31
4.4
29
74
19
115
34
28
21
15
1.94
930--977
22
2.3
20
86
10
62
39
25
16
18
1.91
897--999
53
1.9
53
90
0
161
36
27
19
16
1.93
2542--2574
16
2.0
17
88
5
50
45
24
0
30
1.53
10194--10236
2
22.0
2
95
4
79
48
0
0
51
1.00

Tables:   1

The End!