Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013471.1 Corchorus capsularis cultivar CVL-1 contig13492, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54354

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1068--1101
2
17.0
2
100
0
68
50
0
0
50
1.00
8872--8901
15
2.0
15
100
0
60
40
26
20
13
1.89
10728--10757
2
15.0
2
100
0
60
50
0
0
50
1.00
14606--14647
22
1.9
22
95
0
75
35
7
28
28
1.84
15456--15525
36
1.9
36
100
0
140
35
21
14
28
1.92
29371--29426
29
2.0
28
92
3
94
23
8
21
46
1.79
42755--42910
76
2.0
78
95
5
280
41
28
5
25
1.76
49524--49553
13
2.2
14
94
5
53
56
3
0
40
1.16
53394--53431
19
1.9
19
89
5
58
28
13
7
50
1.69

Tables:   1

The End!