Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013472.1 Corchorus capsularis cultivar CVL-1 contig13493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23385

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1135--1190
29
1.9
29
92
0
94
30
7
26
35
1.83
1136--1197
29
2.1
29
87
0
88
32
8
24
35
1.85
1998--2075
38
2.1
38
92
4
131
50
1
19
29
1.56
3036--3108
17
4.2
17
65
22
53
31
1
4
63
1.22
20690--20860
68
2.6
67
91
2
281
26
9
24
39
1.85
20817--20995
99
1.9
96
82
10
231
26
10
24
39
1.86
21257--21291
16
2.2
16
100
0
70
11
25
17
45
1.81
23235--23293
31
2.0
31
90
6
95
55
11
8
23
1.63

Tables:   1

The End!