Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013473.1 Corchorus capsularis cultivar CVL-1 contig13494, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25071

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--1127
256
4.4
256
97
2
2094
31
13
19
36
1.90
7341--7380
19
2.1
19
100
0
80
25
17
7
50
1.72
8868--8911
21
2.1
21
83
8
54
18
31
9
40
1.81
9101--9173
33
2.2
33
87
4
103
13
31
42
12
1.81
9334--9589
33
7.9
33
85
5
292
12
29
41
16
1.85
10283--10352
29
2.3
30
80
11
90
38
21
18
21
1.93
14321--14422
31
3.4
31
77
13
88
22
17
22
37
1.94
23182--23558
188
2.0
190
95
1
677
32
15
14
36
1.88

Tables:   1

The End!