Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013476.1 Corchorus capsularis cultivar CVL-1 contig13497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19963

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8535--8570
18
2.0
18
94
0
63
27
19
33
19
1.96
8987--9221
109
2.2
110
86
5
327
20
22
22
33
1.97
9029--9253
109
2.1
110
82
5
269
26
22
22
28
1.99
9246--9439
79
2.5
77
82
4
237
36
20
18
24
1.95
9228--9439
39
5.4
39
80
7
214
36
20
18
24
1.95
9984--10346
45
8.2
45
71
13
243
30
25
17
26
1.97
10138--10286
79
1.9
80
81
4
185
29
24
16
30
1.96
10102--10338
124
1.9
126
91
4
388
29
24
18
27
1.98
10317--10366
17
2.8
17
87
9
64
22
32
20
26
1.98
10481--10689
45
4.8
42
76
14
176
27
25
16
29
1.97
10516--10689
45
3.9
45
86
5
246
28
24
17
29
1.97
10517--10689
90
1.9
89
91
3
285
28
24
17
30
1.97
10935--11052
36
3.3
36
81
2
139
26
23
21
28
1.99
11204--11346
46
3.1
45
83
5
171
27
23
16
31
1.96
16107--16206
48
2.1
48
96
0
182
33
9
22
36
1.85

Tables:   1

The End!