Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013477.1 Corchorus capsularis cultivar CVL-1 contig13498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6625

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
154--281
45
2.8
45
82
5
145
40
8
14
36
1.76
33--526
22
22.6
22
69
12
193
40
10
14
34
1.81
1614--1658
13
3.5
13
78
9
56
57
8
0
33
1.30
1614--1672
25
2.4
25
82
5
75
54
8
3
33
1.48
2620--2676
5
10.0
6
83
9
50
1
21
0
77
0.86
2622--2664
5
8.0
5
89
7
59
2
20
0
76
0.89
2620--2677
27
2.2
27
81
9
66
1
20
0
77
0.86

Tables:   1

The End!