Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013484.1 Corchorus capsularis cultivar CVL-1 contig13505, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11624

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
923--962
16
2.5
16
84
8
55
32
10
47
10
1.70
2185--2331
40
3.7
39
91
3
231
49
10
13
25
1.75
2305--2507
85
2.3
86
83
9
261
51
6
18
22
1.70
2525--2603
41
1.9
42
92
2
133
44
11
22
21
1.84
2609--2742
71
1.9
71
92
3
225
49
9
11
29
1.71
2609--2742
36
3.8
35
94
3
223
49
9
11
29
1.71
2801--2888
11
7.9
11
83
2
113
59
7
22
10
1.56
2801--2888
22
4.0
22
89
5
133
59
7
22
10
1.56
2904--3220
109
3.0
103
80
8
307
43
9
22
24
1.82
2916--3248
35
9.5
35
83
5
334
42
9
22
25
1.83
4261--4320
19
3.1
19
68
17
50
35
13
16
35
1.88
6738--6919
93
2.0
93
91
0
292
30
17
18
34
1.94
9431--9476
24
2.0
24
83
12
60
67
21
8
2
1.29
9904--9929
2
13.0
2
100
0
52
50
0
50
0
1.00
11223--11248
3
8.7
3
100
0
52
65
0
0
34
0.93

Tables:   1

The End!